Gene duplication products also called paralogs are homologous genes originating from a common ancestor gene. In contrast to orthologs, they arise through duplication events and not speciation events 1 ...

Alternative splicing (AS) is a major source of transcriptome diversity in plants, but short-read RNA sequencing (RNA-seq) has limited power for resolving full-length transcripts and complex AS ...

Abstract: Pairwise sequence alignment of long reads is a critical step in many bioinformatics analyses. Although many pairwise sequence alignment algorithms have emerged for long-read sequencing data, ...

The chemical industry is navigating a period of structural change, balancing short-term performance pressures with long-term transition commitments. In this environment, GIC’s role is clear: to ...

In today's hyperconnected digital ecosystem, cybersecurity has evolved from a technical concern to a strategic business imperative that transcends geographical boundaries. Whether your organization ...

As human activities increasingly fragment once-continuous habitats, it becomes ever more critical to understand how these changes impact diversity. Negative frequency-dependent (NFD) selection, a key ...

A python implementation (unoptimized and mainly for proof of concept) can be found in http://github.com/bing-jian/gmmreg-python. Recently, a group of researchers from ...

This package contains Python bindings for parasail. Parasail is a SIMD C (C99) library containing implementations of the Smith-Waterman (local), Needleman-Wunsch (global), and semi-global pairwise ...

Abstract: Pairwise sequence alignment algorithms, e.g., Smith-Waterman and Needleman-Wunsch, with adjustable gap penalty systems are widely used in bioinformatics. The strong data dependencies in ...

Viromics produces millions of viral genomes and fragments annually, overwhelming traditional sequence comparison methods. Here we introduce Vclust, an approach that determines average nucleotide ...