KrakenParser is a collection of scripts designed to process Kraken2 reports and convert them into CSV format. This pipeline extracts taxonomic abundance data at six levels: After the pipeline finishes ...
The power of Python trumps Excel workbooks.
At the end of every month, there is a task that I always dread. Gathering numbers from multiple Excel files, copying them into a single summary sheet, converting it to PDF, and sending it via email.
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